Nathaniel Bacon may refer to:

Sir Nathaniel Bacon of Stiffkey (died 1622), lawyer and MP for Norfolk, half-brother of Francis Bacon

Nathaniel Bacon (painter) (1585–1627), landowner and painter, nephew of Francis Bacon

Nathaniel Bacon of Friston (1593–1644), committeeman active with the Suffolk Committees for Scandalous Ministers

Nathaniel Bacon (English politician) (1593–1660), member of parliament representing Cambridge University and Ipswich

Nathaniel Bacon (Jesuit) (1598–1676), secretary of the Society of Jesus (in Rome), 1674–1676

Nathaniel Bacon (Virginia politician) (c. 1620–1692), first cousin of Virginia rebel (see next), president of Virginia's upper house (Governor's Council), plantation owner of Cheatham Annex, and a colonel

Nathaniel Bacon (Virginia colonist) (1647–1676), first cousin of Virginia president (see previous), member of Virginia's lower house (House of Burgesses), plantation owner, and instigator of Bacon's Rebellion in 1676

Nathaniel Bacon (Michigan jurist) (1802–1869), member of the Michigan Supreme Court, 1855–1857